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Uncultivated Atopobium sp. UBA3664 genome recovered from SRX290712

Identifiers
BioSample: SAMN06453194; Sample name: Atopobium sp. UBA3664; SRA: SRS2033018
Organism
Atopobium sp. UBA3664
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium; unclassified Atopobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3664
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290712 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.59%
contamination_estimated0.09%
environmental_sampletrue
genome_coverage19.08
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873602.
Description

Uncultivated genome recovered from an assembly of the SRX290712 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453194
ID:
6453194

BioProject SRA Nucleotide

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