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Uncultivated Ruminococcaceae bacterium UBA3329 genome recovered from SRX803753

Identifiers
BioSample: SAMN06453125; Sample name: Ruminococcaceae bacterium UBA3329; SRA: SRS2038287
Organism
Ruminococcaceae bacterium UBA3329
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3329
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803753 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.61%
contamination_estimated0.67%
environmental_sampletrue
genome_coverage23.59
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702555.
Description

Uncultivated genome recovered from an assembly of the SRX803753 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453125
ID:
6453125

BioProject SRA Nucleotide

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