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Uncultivated Enterobacteriaceae bacterium UBA5995 genome recovered from SRX822475

Identifiers
BioSample: SAMN06453038; Sample name: Enterobacteriaceae bacterium UBA5995; SRA: SRS2038933
Organism
Enterobacteriaceae bacterium UBA5995
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; unclassified Enterobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5995
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822475 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.31%
contamination_estimated4.31%
environmental_sampletrue
genome_coverage33.85
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749092.
Description

Uncultivated genome recovered from an assembly of the SRX822475 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453038
ID:
6453038

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