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Uncultivated Rhodoferax sp. UBA6134 genome recovered from SRX327520

Identifiers
BioSample: SAMN06452788; Sample name: Rhodoferax sp. UBA6134; SRA: SRS2033252
Organism
Rhodoferax sp. UBA6134
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax; unclassified Rhodoferax
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Near Fort McMurray in northeastern Alberta
isolateUBA6134
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327520 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated51.72%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage1397.41
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943325,SRR943327,SRR943323,SRR943326,SRR942940,SRR943328,SRR943324.
Description

Uncultivated genome recovered from an assembly of the SRX327520 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452788
ID:
6452788

BioProject SRA Nucleotide

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