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Uncultivated Thiobacillus sp. UBA3133 genome recovered from SRX667892

Identifiers
BioSample: SAMN06452414; Sample name: Thiobacillus sp. UBA3133; SRA: SRS2035574
Organism
Thiobacillus sp. UBA3133
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Thiobacillaceae; Thiobacillus; unclassified Thiobacillus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Crystal Geyser near Green River, Utah
isolateUBA3133
isolation sourcewater
metagenome sourcegroundwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX667892 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated86.09%
contamination_estimated0.47%
environmental_sampletrue
genome_coverage123.76
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1534387.
Description

Uncultivated genome recovered from an assembly of the SRX667892 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452414
ID:
6452414

BioProject SRA Nucleotide

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