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Uncultivated Ruminococcus sp. UBA4275 genome recovered from SRX290706

Identifiers
BioSample: SAMN06452403; Sample name: Ruminococcus sp. UBA4275; SRA: SRS2032799
Organism
Ruminococcus sp. UBA4275
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; unclassified Ruminococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA4275
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290706 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.55%
contamination_estimated1.03%
environmental_sampletrue
genome_coverage27.14
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873596.
Description

Uncultivated genome recovered from an assembly of the SRX290706 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452403
ID:
6452403

BioProject SRA Nucleotide

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