U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Desulfovibrio sp. UBA4079 genome recovered from SRX211001

Identifiers
BioSample: SAMN06452288; Sample name: Desulfovibrio sp. UBA4079; SRA: SRS2032579
Organism
Desulfovibrio sp. UBA4079
cellular organisms; Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; unclassified Desulfovibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude tailings pond, Wood Buffalo, Alberta
isolateUBA4079
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX211001 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.88%
contamination_estimated0.59%
environmental_sampletrue
genome_coverage17.7
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636597.
Description

Uncultivated genome recovered from an assembly of the SRX211001 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452288
ID:
6452288

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center