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Uncultivated Oblitimonas sp. UBA2435 genome recovered from SRX144196

Identifiers
BioSample: SAMN06452057; Sample name: Oblitimonas sp. UBA2435; SRA: SRS2032279
Organism
Oblitimonas sp. UBA2435
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Thiopseudomonas; unclassified Thiopseudomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA2435
isolation sourcebioreactor
metagenome sourcebioreactor metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX144196 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.66%
contamination_estimated1.08%
environmental_sampletrue
genome_coverage25.27
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR490742.
Description

Uncultivated genome recovered from an assembly of the SRX144196 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452057
ID:
6452057

BioProject SRA Nucleotide

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