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Uncultivated Syntrophaceae bacterium UBA6807 genome recovered from SRX545991

Identifiers
BioSample: SAMN06451967; Sample name: Syntrophaceae bacterium UBA6807; SRA: SRS2034157
Organism
Syntrophaceae bacterium UBA6807
cellular organisms; Bacteria; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6807
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX545991 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.13%
contamination_estimated3.55%
environmental_sampletrue
genome_coverage29.07
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1290767,SRR1290771,SRR1290769,SRR1290772,SRR1290774,SRR1290764.
Description

Uncultivated genome recovered from an assembly of the SRX545991 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451967
ID:
6451967

BioProject SRA Nucleotide

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