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Uncultivated Stenotrophomonas sp. UBA7606 genome recovered from SRX822849

Identifiers
BioSample: SAMN06451953; Sample name: Stenotrophomonas sp. UBA7606; SRA: SRS2039252
Organism
Stenotrophomonas sp. UBA7606
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; unclassified Stenotrophomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA7606
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822849 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.25%
contamination_estimated2.45%
environmental_sampletrue
genome_coverage20.14
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749466.
Description

Uncultivated genome recovered from an assembly of the SRX822849 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451953
ID:
6451953

BioProject SRA Nucleotide

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