U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Alcaligenaceae bacterium UBA971 genome recovered from SRX474032

Identifiers
BioSample: SAMN06451938; Sample name: Alcaligenaceae bacterium UBA971; SRA: SRS2033926
Organism
Alcaligenaceae bacterium UBA971
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; unclassified Alcaligenaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: Alicante
isolateUBA971
isolation source0.22 micron fraction from Freshwater Reservoir Amadorio
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX474032 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated86.45%
contamination_estimated6.99%
environmental_sampletrue
genome_coverage8.76
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR1173821.
Description

Uncultivated genome recovered from an assembly of the SRX474032 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451938
ID:
6451938

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center