U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Leptolinea sp. UBA1437 genome recovered from ERX250271

Identifiers
BioSample: SAMN06451860; Sample name: Leptolinea sp. UBA1437; SRA: SRS2030501
Organism
Leptolinea sp. UBA1437
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; Anaerolineae; Anaerolineales; Anaerolineaceae; Leptolinea; unclassified Leptolinea
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMalaysia
isolateUBA1437
isolation sourceclosed biodigester
metagenome sourcepalm oil mill effluent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX250271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated74.61%
contamination_estimated2.00%
environmental_sampletrue
genome_coverage9.74
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
Description

Uncultivated genome recovered from an assembly of the ERX250271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451860
ID:
6451860

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center