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Uncultivated Proteiniphilum sp. UBA4888 genome recovered from SRX691277

Identifiers
BioSample: SAMN06451273; Sample name: Proteiniphilum sp. UBA4888; SRA: SRS2035862
Organism
Proteiniphilum sp. UBA4888
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Proteiniphilum; unclassified Proteiniphilum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA4888
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691277 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated80.33%
contamination_estimated3.88%
environmental_sampletrue
genome_coverage100.05
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562002.
Description

Uncultivated genome recovered from an assembly of the SRX691277 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451273
ID:
6451273

BioProject SRA Nucleotide

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