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Uncultivated Pelobacter sp. UBA5610 genome recovered from SRX211342

Identifiers
BioSample: SAMN06451153; Sample name: Pelobacter sp. UBA5610; SRA: SRS2032620
Organism
Pelobacter sp. UBA5610
cellular organisms; Bacteria; Thermodesulfobacteriota; Desulfuromonadia; Desulfuromonadales; Desulfuromonadaceae; Pelobacter; unclassified Pelobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude, Ft. McMurray, Alberta
isolateUBA5610
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX211342 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated76.63%
contamination_estimated2.46%
environmental_sampletrue
genome_coverage51.7
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
Description

Uncultivated genome recovered from an assembly of the SRX211342 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451153
ID:
6451153

BioProject SRA Nucleotide

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