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Uncultivated Novosphingobium sp. UBA6272 genome recovered from SRX277355

Identifiers
BioSample: SAMN06450944; Sample name: Novosphingobium sp. UBA6272; SRA: SRS2032757
Organism
Novosphingobium sp. UBA6272
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium; unclassified Novosphingobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Hong Kong
isolateUBA6272
isolation sourceactivated sludge
metagenome sourceactivated sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX277355 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.73%
contamination_estimated0.90%
environmental_sampletrue
genome_coverage84.03
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the activated sludge metagenome reads: SRR1055898,SRR850207.
Description

Uncultivated genome recovered from an assembly of the SRX277355 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450944
ID:
6450944

BioProject SRA Nucleotide

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