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Uncultivated Klebsiella variicola UBA6000 genome recovered from SRX822477

Identifiers
BioSample: SAMN06450861; Sample name: Klebsiella variicola UBA6000; SRA: SRS2038938
Organism
Klebsiella variicola
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6000
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822477 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.50%
contamination_estimated0.13%
environmental_sampletrue
genome_coverage31.3
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749094.
Description

Uncultivated genome recovered from an assembly of the SRX822477 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450861
ID:
6450861

BioProject SRA Nucleotide

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