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Uncultivated Porticoccaceae bacterium UBA5971 genome recovered from SRX1033067

Identifiers
BioSample: SAMN06450757; Sample name: Porticoccaceae bacterium UBA5971; SRA: SRS2031990
Organism
Porticoccaceae bacterium UBA5971
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Porticoccaceae; unclassified Porticoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBaltic Sea
isolateUBA5971
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1033067 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.41%
contamination_estimated1.36%
environmental_sampletrue
genome_coverage17.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2032810.
Description

Uncultivated genome recovered from an assembly of the SRX1033067 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450757
ID:
6450757

BioProject SRA Nucleotide

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