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Uncultivated Rhodospirillaceae bacterium UBA6219 genome recovered from SRX327522

Identifiers
BioSample: SAMN06450710; Sample name: Rhodospirillaceae bacterium UBA6219; SRA: SRS2033353
Organism
Rhodospirillaceae bacterium UBA6219
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; unclassified Rhodospirillaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6219
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327522 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.83%
contamination_estimated1.69%
environmental_sampletrue
genome_coverage62.99
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
Description

Uncultivated genome recovered from an assembly of the SRX327522 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450710
ID:
6450710

BioProject SRA Nucleotide

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