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Uncultivated Flavobacteriaceae bacterium UBA6231 genome recovered from SRX327522

Identifiers
BioSample: SAMN06450460; Sample name: Flavobacteriaceae bacterium UBA6231; SRA: SRS2033365
Organism
Flavobacteriaceae bacterium UBA6231
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; unclassified Flavobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6231
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327522 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.86%
contamination_estimated4.00%
environmental_sampletrue
genome_coverage30.87
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
Description

Uncultivated genome recovered from an assembly of the SRX327522 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450460
ID:
6450460

BioProject SRA Nucleotide

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