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Uncultivated Methanosarcina sp. UBA398 genome recovered from SRX691280

Identifiers
BioSample: SAMN06027312; Sample name: Methanosarcina sp. UBA398; SRA: SRS1809444
Organism
Methanosarcina sp. UBA398
cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; unclassified Methanosarcina
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA398
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691280
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.88%
contamination_estimated0.33%
environmental-sampleTRUE
genome_coverage83.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomicTRUE
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
Description

Uncultivated genome recovered from an assembly of the SRX691280 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2016-11-16
Accession:
SAMN06027312
ID:
6027312

BioProject SRA Nucleotide

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