Pathogen: clinical or host-associated sample from ... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Pathogen: clinical or host-associated sample from Escherichia coli

Identifiers: BioSample: SAMN05806164; Sample name: 0000-0060-5825; SRA: SRS1712871

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

isolate	243
collected by	Brigham and Women's Hospital
collection date	2016
geographic location	USA:Boston
host	Homo sapiens
host disease	Missing
isolation source	urine
latitude and longitude	Missing
host age	77
host sex	female
host subject id	Ecoli-127

BioProject: PRJNA278886
Retrieve all samples from this project

Submission: Brigham & Women's Hospital, Xiaomin Zhao; 2016-09-22

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
amoxicillin-clavulanic acid	intermediate	==	16/8	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ampicillin	resistant	>=	32	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefazolin	susceptible	==	8	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefepime	intermediate	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefoxitin	resistant	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftazidime	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftriaxone	resistant	>=	4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ciprofloxacin	susceptible	<=	0.5	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ertapenem	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
gentamicin	resistant	>=	8	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
levofloxacin	susceptible	<=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
piperacillin-tazobactam	susceptible	==	8/4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tobramycin	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tetracycline	susceptible	==	2	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
trimethoprim-sulfamethoxazole	resistant	>=	16/304	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
meropenem	susceptible	<=	0.25	mg/L	MIC	Vitek	Biomérieux	missing	CLSI

Accession:: SAMN05806164
ID:: 5806164

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Pathogen: clinical or host-associated sample from Escherichia coli
Pathogen: clinical or host-associated sample from Escherichia coli

biosample
Microbe sample from Clostridioides difficile
Microbe sample from Clostridioides difficile

biosample
Pathogen: clinical or host-associated sample from Staphylococcus aureus
Pathogen: clinical or host-associated sample from Staphylococcus aureus

biosample
Pathogen: clinical or host-associated sample from Clostridioides difficile
Pathogen: clinical or host-associated sample from Clostridioides difficile

biosample
Pathogen: clinical or host-associated sample from Enterococcus faecium
Pathogen: clinical or host-associated sample from Enterococcus faecium

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample