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Sample from Xylanibacter oryzae DSM 17970

Identifiers
BioSample: SAMN02849400; SRA: SRS1566637; GenBank: JFBS
Organism
Xylanibacter oryzae DSM 17970
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Xylanibacter; Xylanibacter oryzae
Attributes
strainDSM 17970
culture collectionDSM:17970
geographic locationJapan
investigation typebacteria_archaea
isolation and growth condition16957124
latitude and longitude38.25222 N 140.335602 E
project nameXylanibacter oryzae KB 3, DSM 17970
reference for biomaterialDSM 17970, JCM 13648
observed biotic relationshipfree living
relationship to oxygenobligate anaerobe
submitter-asserted type strainYes
pH5.7 - 6.2
diseaseNone
assemblyALLPATHS v. R37654
environmentRice paddies; Soil; Host
sequencing_methWGS
GOLD Stamp IDGi04512
Current Finishing StatusLevel 5: Non-contiguous Finished
Funding ProgramDOE-CSP 2010
Gene Calling MethodProdigal 1.4, GenePRIMP
Isolation Siterice-plant residue in flooded anoxic rice-field soil in Yamagata, Japan
Cell ShapeRod-shaped
MotilityNonmotile
SporulationNonsporulating
Temperature RangeMesophile
Temperature Optimum30
Gram StainingGram-
type-materialtype strain of Xylanibacter oryzae
BioProject
PRJNA64555 Xylanibacter oryzae DSM 17970
Retrieve all samples from this project

Submission
DOE Joint Genome Institute; 2014-06-10
Accession:
SAMN02849400
ID:
2849400

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