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Caltech_RnaSeq_HCT-116_2x75_200

Identifiers
BioSample: SAMN01087963; SRA: SRS350192; GEO: GSM958749
Organism
Homo sapiens (human)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo
Attributes
source nameHCT-116
biomaterial providerATCC
treatmentNone
biomaterial_typeimmortalized cell line
lineHCT-116
datatypeRnaSeq
datatype descriptionSequencing analysis of RNA expression
readtype2x75
readtype descriptionPaired 75 nt reads
insertlength200
insertlength descriptioninsert length of 200nt
labexpid12097,12096
mapalgorithmTH1014
mapalgorithm descriptionTopHat v1.0.14
readtype2x75
readtype descriptionPaired 75 nt reads
replicate1,2
insertlength200
insertlength descriptioninsert length of 200nt
treatment descriptionNo special treatment or protocol applies
labexpid12096
mapalgorithmTH1014
mapalgorithm descriptionTopHat v1.0.14
readtype2x75
readtype descriptionPaired 75 nt reads
replicate1
Links
GEO Sample GSM958749
BioProject
PRJNA30709 Homo sapiens
Retrieve all samples from this project

Submission
ENCODE DCC, ENCODE DCC; 2012-07-13
Accession:
SAMN01087963
ID:
1087963

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