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Duke_DnaseSeq_GM19239

Identifiers
BioSample: SAMN00739122; SRA: SRS266950; GEO: GSM816659
Organism
Homo sapiens (human)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo
Attributes
source nameGM19239
biomaterial providerCoriell
cell linemesoderm
treatmentNone
datatypeDnaseSeq
datatype descriptionDNaseI HS Sequencing
cell descriptionB-lymphocyte, lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed
controlidgeneric_male
labversionbaseAlignCounts.pl v 1,fseq v 1.84, iff_generic_male,p-value cutoff: 0.05
replicate1,2
cell descriptionB-Lymphocyte, Lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, Treatment: Epstein-Barr Virus transformed
cell karyotypeunknown
cell sexM
treatment descriptionNo special treatment or protocol applies
controlidgeneric_male
labversionalign_on_cluster_bwa.pl v 1
replicate1
replicate descriptiontier 1
Links
GEO Sample GSM816659
BioProject
PRJNA63443 Homo sapiens
Retrieve all samples from this project

Submission
ENCODE DCC, ENCODE DCC; 2011-10-14
Accession:
SAMN00739122
ID:
739122

BioProject SRA GEO DataSets

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