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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus oris F0423

Identifiers
BioSample: SAMN00195308; Sample name: HMPREF9102; SRA: SRS156925
Organism
Limosilactobacillus oris F0423
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus oris
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated size2175000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameLactobacillus oris F0423
geographic locationnot determined
source material identifiersBEI HM-560
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainF0423
environmental packagemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft16.4x;20
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyCA 6.1
misc_param: HMP supersiteoral
sequencing method454-GS-FLX-Titanium
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

454 Titanium 3kb

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA61831 Limosilactobacillus oris F0423
Retrieve all samples from this project

Submission
JCVI; 2011-01-21
Accession:
SAMN00195308
ID:
195308

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