Human gut genome

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Result Filters

Organism: uncultured Mycoplasma sp.
cellular organisms; Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; environmental samples

Attributes

broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
geographic location	not provided
investigation type	metagenome
isolation source	human gut
project name	Human gut genomes
sample name	MGYG-HGUT-04352
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-08-06T09:57:10Z
ENA-LAST-UPDATE	2019-08-09T12:56:30Z
External Id	SAMEA5853859
INSDC center name	EMG
INSDC first public	2019-08-06T09:57:10Z
INSDC last update	2019-08-09T12:56:30Z
INSDC status	public
Submitter Id	MGYG-HGUT-04352
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
broker name	EBI-EMG
common name	uncultured Mycoplasma sp.
completeness score	92.42
contamination score	1.12
metagenomic source	human gut metagenome
sample derived from	ERS971890
scientific_name	uncultured Mycoplasma sp.

BioProject: PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Human gut genome
Human gut genome

biosample
Homo sapiens protocadherin alpha subfamily C, 1 (PCDHAC1), transcript variant 1,...
Homo sapiens protocadherin alpha subfamily C, 1 (PCDHAC1), transcript variant 1, mRNA
gi|1788703473|ref|NM_018898.5|

Nucleotide

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