Human gut genome

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Result Filters

Organism: uncultured Collinsella sp.
cellular organisms; Bacteria; Bacillati; Actinomycetota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples

Attributes

broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
geographic location	not provided
investigation type	metagenome
isolation source	human gut
project name	Human gut genomes
sample name	MGYG-HGUT-04335
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-08-06T09:57:10Z
ENA-LAST-UPDATE	2019-08-09T12:56:30Z
External Id	SAMEA5853842
INSDC center name	EMG
INSDC first public	2019-08-06T09:57:10Z
INSDC last update	2019-08-09T12:56:30Z
INSDC status	public
Submitter Id	MGYG-HGUT-04335
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
broker name	EBI-EMG
common name	uncultured Collinsella sp.
completeness score	99.19
contamination score	0.81
metagenomic source	human gut metagenome
sample derived from	ERS971850
scientific_name	uncultured Collinsella sp.

BioProject: PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Human gut genome
Human gut genome

biosample
Roseburia hominis isolate MGYG-HGUT-02517 genome assembly, chromosome: 1
Roseburia hominis isolate MGYG-HGUT-02517 genome assembly, chromosome: 1
gi|1721134209|emb|LR699011.1|

Nucleotide
Bifidobacterium bifidum isolate MGYG-HGUT-02396 genome assembly, chromosome: 1
Bifidobacterium bifidum isolate MGYG-HGUT-02396 genome assembly, chromosome: 1
gi|1721134189|emb|LR698991.1|

Nucleotide

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