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Human gut genome

Identifiers
BioSample: SAMEA5853093; SRA: ERS3641617
Organism
uncultured Ruminococcus sp.
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03587
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:58Z
ENA-LAST-UPDATE2019-08-09T12:56:23Z
External IdSAMEA5853093
INSDC center nameEMG
INSDC first public2019-08-06T09:56:58Z
INSDC last update2019-08-09T12:56:23Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03587
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Ruminococcus sp.
completeness score82.55
contamination score0.13
metagenomic sourcehuman gut metagenome
sample derived fromSRS476292
scientific_nameuncultured Ruminococcus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853093
ID:
12522089

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