Human gut genome

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Organism: uncultured Porphyromonadaceae bacterium
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; environmental samples

Attributes

broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
geographic location	Sweden
investigation type	metagenome
isolation source	human gut
project name	Human gut genomes
sample name	MGYG-HGUT-01030
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-08-06T09:56:19Z
ENA-LAST-UPDATE	2019-08-09T12:56:06Z
External Id	SAMEA5850533
INSDC center name	EMG
INSDC first public	2019-08-06T09:56:19Z
INSDC last update	2019-08-09T12:56:06Z
INSDC status	public
Submitter Id	MGYG-HGUT-01030
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
broker name	EBI-EMG
common name	uncultured Porphyromonadaceae bacterium
completeness score	94.4
contamination score	0.94
metagenomic source	human gut metagenome
sample derived from	ERS235564
scientific_name	uncultured Porphyromonadaceae bacterium

BioProject: PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Human gut genome
Human gut genome

biosample
Mus musculus arylformamidase (Afmid), transcript variant 2, mRNA
Mus musculus arylformamidase (Afmid), transcript variant 2, mRNA
gi|1388153561|ref|NM_001363159.1|

Nucleotide
Mus musculus arylformamidase (Afmid), mRNA
Mus musculus arylformamidase (Afmid), mRNA
gi|31560783|ref|NM_027827.2|

Nucleotide
Paenibacillus odorifer isolate MGYG-HGUT-02414 genome assembly, chromosome: 1
Paenibacillus odorifer isolate MGYG-HGUT-02414 genome assembly, chromosome: 1
gi|1721134196|emb|LR698998.1|

Nucleotide
Homo sapiens arylformamidase, mRNA (cDNA clone MGC:164455 IMAGE:40146846), compl...
Homo sapiens arylformamidase, mRNA (cDNA clone MGC:164455 IMAGE:40146846), complete cds
gi|124375909|gb|BC132824.1|

Nucleotide

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