U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Canada Basin MAG CB9_323.88

Identifiers
BioSample: SAMEA114238385; SRA: ERS16223836
Organism
Bryobacterales bacterium
cellular organisms; Bacteria; Acidobacteriota; Terriglobia; Bryobacterales; unclassified Bryobacterales
Attributes
broad-scale environmental contextmarine biome (ENVO:00000447)
collection date2017-09-19
environmental mediumsea water (ENVO:00002149 )
geographic locationArctic Ocean
isolation sourceMAG reconstructed from a metagenome collected in the Canada Basin (Arctic Ocean) at salinity of 32.3 PSU
project nameBeaufort Gyre Obsering System and Joint Ocean and Ice Studies
sample nameCB9_323.88
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2023-10-28T00:34:17Z
ENA-LAST-UPDATE2023-10-28T00:34:17Z
External IdSAMEA114238385
INSDC center nameConcordia University
INSDC first public2023-10-28T00:34:17Z
INSDC last update2023-10-28T00:34:17Z
INSDC statuspublic
Submitter IdCB9_323.88
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareSpades;3.12.0;kmer set 33, 55, 77, 99,127, default parameters otherwise
binning parametersDefault parameters; minimum scaffold length 2500 bp
binning softwareMetabat2 v.2.12.1
completeness score32.88
completeness softwareCheckM v.1.0.7
contamination score2.35
geographic location (latitude)77.9972
geographic location (longitude)149.9302
local environmental context1000m depth (ENVO:XXXXXXXX)
metagenomic sourceaquatic metagenome
sample derived fromERS15586170
scientific_nameBryobacterales bacterium
taxonomic identity markerMulti-marker approach
Description

Uncultivated Acidobacteriae bacterium recovered from ERS15586170

BioProject
PRJEB57575 Microbiomes of the Canada Basin, Arctic Ocean
Retrieve all samples from this project

Submission
EBI; 2023-10-29
Accession:
SAMEA114238385
ID:
38029958

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center