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bin.192 MAG

Identifiers
BioSample: SAMEA112746652; SRA: ERS14741914
Organism
Prochlorococcus marinus str. MIT 9313
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Prochlorococcaceae; Prochlorococcus; Prochlorococcus marinus
Attributes
broad-scale environmental contextENVO_01000023
collection date2011-07-02
environmental mediumENVO_00002006
geographic locationAtlantic Ocean
isolation sourceNorth Atlantic
project nameGEN_BGC Atlantic-Pacific 2011
sample namebin.192 MAG
strainMIT 9313
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2023-03-06
ENA-LAST-UPDATE2023-03-06
External IdSAMEA112746652
INSDC center aliasIDAEA-CSIC
INSDC center nameIDAEA-CSIC
INSDC first public2023-03-06T12:25:11Z
INSDC last update2023-03-06T12:25:11Z
INSDC statuspublic
Submitter Idbin.192 MAG
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMEGAHIT
binning parametersdefault
binning softwareMetaBAT2
completeness score84.26
completeness softwareCheckM
contamination score2.16
geographic location (latitude)23.766
geographic location (longitude)-41.918
local environmental contextENVO_01000035
metagenomic sourcemarine metagenome
sample derived fromERS14678684,ERS14678685,ERS14678686,ERS14678687,ERS14678688,ERS14678689,ERS14678690,ERS14678691,ERS14678692,ERS14678693,ERS14678694,ERS14678695
scientific_nameProchlorococcus marinus str. MIT 9313
taxonomic identity markerGTDB-Tk bac120
Description

GEN_BGC Atlantic-Pacific 2011 bin.192 MAG

BioProject
PRJEB60184 Responses to organic pollutants in the tropical Pacific and subtropical Atlantic oceans by pelagic marine bacteria
Retrieve all samples from this project

Submission
EBI; 2023-03-08
Accession:
SAMEA112746652
ID:
33676983

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