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Chloroplast assembly of Polytrias indica collected in Burkina Faso

Identifiers
BioSample: SAMEA104455088; SRA: ERS2073030
Organism
Polytrias indica
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Apludinae; Polytrias
Attributes
collected byAliou Diop, Cheikh Anta Diop University
collection date2017-08-20
geographic locationBurkina Faso
identified byDyfed Lloyd Evans
sample namePIDiop1
tissueleaf
ENA first public2018-11-12
ENA last update2018-01-08
ENA-CHECKLISTERC000011
External IdSAMEA104455088
INSDC center aliasSouth African Sugarcane Research Institute
INSDC center nameSouth African Sugarcane Research Institute
INSDC first public2018-11-12T17:02:46Z
INSDC last update2018-01-08T13:27:22Z
INSDC statuspublic
Submitter IdPIDiop1
geographic location (region and locality)Comoé, Mangodara
Description

Using 12 novel PCR primers, the complete sequence of Polytrias indica was sequenced with the Illumina platform. Reads were assembled with spades and polished with Pilon prior to annotation with a novel pipeline based on Verdant.

BioProject
PRJEB17861 Primer-based Chloroplast Sequencing and Assembly
Retrieve all samples from this project

Submission
EBI; 2018-11-13
Accession:
SAMEA104455088
ID:
10413492

BioProject Nucleotide

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