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BioSample

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MIGS Cultured Bacterial/Archaeal sample from Anaerococcus vaginalis ATCC 51170

Identifiers: BioSample: SAMN00120584; SRA: SRS121485

Organism: Anaerococcus vaginalis ATCC 51170
cellular organisms; Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales; Peptoniphilaceae; Anaerococcus; Anaerococcus vaginalis

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	1875000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Anaerococcus vaginalis ATCC 51170
geographic location	not determined
source material identifiers	ATCC 51170
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
environmental package	missing
strain	ATCC 51170
culture collection	ATCC:51170
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft35x;28
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler v. 2.0.0-Eclipse
misc_param: HMP supersite	skin
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-Paired-end

Description

Anaerococcus vaginalis strain ATCC 51170

Keywords: GSC:MIxS;MIGS:6.0

Links: Homo sapiens Microbiome Project at Baylor College of Medicine

BioProject: PRJNA38727 Anaerococcus vaginalis ATCC 51170
Retrieve all samples from this project

Submission: BCM; 2010-11-19

Accession:: SAMN00120584
ID:: 120584

BioProject SRA Nucleotide

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MIGS Cultured Bacterial/Archaeal sample from Anaerococcus vaginalis ATCC 51170
MIGS Cultured Bacterial/Archaeal sample from Anaerococcus vaginalis ATCC 51170

biosample
txid655811[Organism:noexp] (1)
BioSample
IGLC1 immunoglobulin lambda constant 1 [Homo sapiens]
IGLC1 immunoglobulin lambda constant 1 [Homo sapiens]
Gene ID:3537

Gene
Gene Links for GEO Profiles (Select 55744274) (1)
Gene
Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 2, mRNA (cDNA clon...
Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 2, mRNA (cDNA clone MGC:26529 IMAGE:4828484), complete cds
gi|34192525|gb|BC034961.2|

Nucleotide

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LinkOut to external resources

Anaerococcus vaginalis CCUG 31349 - CIP 103621 - KCTC 15028 [BacDive]
Anaerococcus vaginalis CCUG 31349 - CIP 103621 - KCTC 15028
BacDive

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