Opitutae-Tous-C5TDCM

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Result Filters

Organism: Opitutia bacterium Tous-C5TDCM
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; Opitutia; unclassified Opitutia

Attributes

broad-scale environmental context	Freshwater biome
isolation source	freshwater reservoir from 13m depth
depth	13 m
geographic location	Spain: Tous, Valencia
collection date	2016-07-21
latitude and longitude	39.14 N 0.65 W
isolate	Tous-C5TDCM
metagenome source	freshwater metagenome
sample type	metagenomic assembly
environmental-sample	TRUE
metagenomic	TRUE
note	This BioSample is a metagenomic assembly obtained from the Reservoir Tous freshwater metagenome BioSamples: SAMN06564105

Description: The study aims to describe the microbial community of a freshwater reservoir using high throughput sequencing. The reservoir is called Tous and is located in the region of Valencia, Spain. Water was collected and filtered through a series of polycarbonate filters, a 20 micron prefilter, 5 micron (for large cells and eukaryotes) and 0.22 (for planktonic microbes). DNA was extracted from the 0.22 micron filter (small, planktonic fraction) filter to obtain genomic DNA of the microbial community. This Verrucomicrobia genome was reconstructed through the metagenomic assembled contigs of Tous 12m and 25m depth.