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BioSample

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Uncultivated Thiotrichaceae bacterium UBA5859 genome recovered from SRX696248

Identifiers: BioSample: SAMN06450534; Sample name: Thiotrichaceae bacterium UBA5859; SRA: SRS2036107

Organism: Thiotrichaceae bacterium UBA5859
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; unclassified Thiotrichaceae

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA: Municipal Pensacola Beach, FL
isolate	UBA5859
isolation source	beach sand
metagenome source	beach sand metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX696248 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	96.11%
contamination_estimated	1.23%
environmental_sample	true
genome_coverage	8.88
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1570769.

Description: Uncultivated genome recovered from an assembly of the SRX696248 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06450534
ID:: 6450534

BioProject SRA Nucleotide

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Uncultivated Thiotrichaceae bacterium UBA5859 genome recovered from SRX696248
Uncultivated Thiotrichaceae bacterium UBA5859 genome recovered from SRX696248

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