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Uncultivated Ruminococcaceae bacterium UBA5461 genome recovered from SRX691286

Identifiers
BioSample: SAMN06452764; Sample name: Ruminococcaceae bacterium UBA5461; SRA: SRS2036078
Organism
Ruminococcaceae bacterium UBA5461
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Mianyang
isolateUBA5461
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691286 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated77.18%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage352.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562011.
Description

Uncultivated genome recovered from an assembly of the SRX691286 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452764
ID:
6452764

BioProject SRA Nucleotide

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