U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Hyphomicrobiaceae bacterium UBA4118 genome recovered from SRX710559

Identifiers
BioSample: SAMN06453436; Sample name: Hyphomicrobiaceae bacterium UBA4118; SRA: SRS2036135
Organism
Hyphomicrobiaceae bacterium UBA4118
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Hyphomicrobiaceae; unclassified Hyphomicrobiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Axel Heiberg Island,Nunavut
isolateUBA4118
isolation sourcesoil
metagenome sourcesoil metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX710559 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.14%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage17.7
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1586255.
Description

Uncultivated genome recovered from an assembly of the SRX710559 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453436
ID:
6453436

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center