U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Enterobacteriaceae bacterium UBA3107 genome recovered from SRX822500

Identifiers
BioSample: SAMN06456477; Sample name: Enterobacteriaceae bacterium UBA3107; SRA: SRS2038955
Organism
Enterobacteriaceae bacterium UBA3107
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; unclassified Enterobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3107
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822500 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.64%
contamination_estimated0.42%
environmental_sampletrue
genome_coverage38.97
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749117.
Description

Uncultivated genome recovered from an assembly of the SRX822500 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456477
ID:
6456477

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center