Warning: The NCBI web site requires JavaScript to function. more...

BioSample

National Center for Biotechnology Information

Result Filters

Uncultivated Phycisphaerales bacterium UBA4658 genome recovered from ERX682739

Identifiers: BioSample: SAMN06457178; Sample name: Phycisphaerales bacterium UBA4658; SRA: SRS2031819

Organism: Phycisphaerales bacterium UBA4658
cellular organisms; Bacteria; PVC group; Planctomycetota; Phycisphaerae; Phycisphaerales; unclassified Phycisphaerales

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	NULL
isolate	UBA4658
isolation source	lake water
metagenome source	freshwater metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in ERX682739 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	77.69%
contamination_estimated	1.14%
environmental_sample	true
genome_coverage	15.88
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: ERR739056.

Description: Uncultivated genome recovered from an assembly of the ERX682739 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06457178
ID:: 6457178

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Search details

Recent activity

Clear Turn Off Turn On

Uncultivated Phycisphaerales bacterium UBA4658 genome recovered from ERX682739
Uncultivated Phycisphaerales bacterium UBA4658 genome recovered from ERX682739

biosample
txid1951200[Organism:noexp] (1)
BioSample
Pvr.3176[UniGene Cluster Number] AND (alive[prop]) (0)
Gene
Eriocaulon matopense[orgn] (0)
BioProject
PMC Links for Nucleotide (Select 540067197) (1)
PMC

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample