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Uncultivated Alphaproteobacteria bacterium UBA6347 genome recovered from SRX834626

Identifiers
BioSample: SAMN06453395; Sample name: Alphaproteobacteria bacterium UBA6347; SRA: SRS2035078
Organism
Alphaproteobacteria bacterium UBA6347
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA6347
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834626 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated78.38%
contamination_estimated0.33%
environmental_sampletrue
genome_coverage12.08
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747025.
Description

Uncultivated genome recovered from an assembly of the SRX834626 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453395
ID:
6453395

BioProject SRA Nucleotide

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