U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Verrucomicrobia bacterium UBA3222 genome recovered from SRX290720

Identifiers
BioSample: SAMN06454602; Sample name: Verrucomicrobia bacterium UBA3222; SRA: SRS2033188
Organism
Verrucomicrobia bacterium UBA3222
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; unclassified Verrucomicrobiota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3222
isolation sourcehigh methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290720 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.44%
contamination_estimated3.38%
environmental_sampletrue
genome_coverage15.32
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873610.
Description

Uncultivated genome recovered from an assembly of the SRX290720 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454602
ID:
6454602

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center