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Uncultivated Lactobacillus sp. UBA5813 genome recovered from SRX1363837

Identifiers
BioSample: SAMN06451435; Sample name: Lactobacillus sp. UBA5813; SRA: SRS2032264
Organism
Lactobacillus sp. UBA5813
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; unclassified Lactobacillus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationColombia: Santander de Quilichao
isolateUBA5813
isolation sourcecassava fermentation tank
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1363837 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.16%
contamination_estimated1.30%
environmental_sampletrue
genome_coverage87.01
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR2753156.
Description

Uncultivated genome recovered from an assembly of the SRX1363837 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451435
ID:
6451435

BioProject SRA Nucleotide

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