U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Flavobacterium sp. UBA6195 genome recovered from SRX327522

Identifiers
BioSample: SAMN06457395; Sample name: Flavobacterium sp. UBA6195; SRA: SRS2033423
Organism
Flavobacterium sp. UBA6195
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium; unclassified Flavobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6195
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327522 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.89%
contamination_estimated1.12%
environmental_sampletrue
genome_coverage687.72
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
Description

Uncultivated genome recovered from an assembly of the SRX327522 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457395
ID:
6457395

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center