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Uncultivated Clostridium sp. UBA4548 genome recovered from SRX822536

Identifiers
BioSample: SAMN06455279; Sample name: Clostridium sp. UBA4548; SRA: SRS2038980
Organism
Clostridium sp. UBA4548
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; unclassified Clostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4548
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822536 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.79%
contamination_estimated5.85%
environmental_sampletrue
genome_coverage34.13
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749153.
Description

Uncultivated genome recovered from an assembly of the SRX822536 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455279
ID:
6455279

BioProject SRA Nucleotide

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