Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Phalanger vestitus
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Phalanger

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55339
sex	male
tissue	liver
BPA_library_ID	55339
BPA_sample_ID	41928
CALLABLE	1408977
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:43Z
External Id	SAMEA7321319
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:43Z
INSDC status	public
LOW_COVERAGE	151398
NO_COVERAGE	196
ReadLength	150bp
Submitter Id	55339
TCCP_ID	55339_HWWJFAFXY_TAGTCTA_S75
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Stein's cuscus
decimal_latitude	-5.1
decimal_longitude	141.7
depthmean	132.04
depthmedian	96
family	Phalangeridae
genus	Phalanger
geographic location (region and locality)	Sandaun Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Sol River
order	Diprotodontia
phylum	Chordata
scientific_name	Phalanger vestitus
sequencing method	Illumina SBS, short PE reads
species	vestitus
state_or_region	Sandaun Province
tissue_number	ABTC47218
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6375
totalpaired	0.6027
totalreadsstart	2685756
voucher_number	AM M.16689
voucher_or_tissue_number	AM M.16689

BioProject: PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals G...
Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

biosample
txid175809[Organism:noexp] (1)
BioSample
Homo sapiens partial mRNA for aldo-keto reductase family 1, member D1 (AKR1D1 ge...
Homo sapiens partial mRNA for aldo-keto reductase family 1, member D1 (AKR1D1 gene), alternative transcript 1
gi|237768375|emb|FM160741.1|

Nucleotide
NADH:ubiquinone oxidoreductase [Naegleria gruberi]
NADH:ubiquinone oxidoreductase [Naegleria gruberi]
gi|284090050|gb|EFC43704.1||gnl|WGS |NAEGRDRAFT_79997

Protein