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  • The following term was not found in BioSample: syncytin.

Alistipes putredinis DSM 17216

Identifiers
BioSample: SAMN00000002; Sample name: 19655; SRA: SRS000002
Organism
Alistipes putredinis DSM 17216
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes putredinis
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated size2550000
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameAlistipes putredinis DSM 17216
geographic locationnot determined
source material identifiersDSM 17216, CCUG 45780, CIP 104286, ATCC 29800, Carlier 10203, VPI 3293
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
isolation and growth conditionnot determined
environmental packagemissing
strainDSM 17216
isolation sourcemissing
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft11.6x;20
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyPCAP
misc_param: HMP supersitegastrointestinal_tract
sequencing method454-GS20, Sanger
type-materialtype strain of Bacteroides putredinis
Description

Alistipes putredinis (GenBank Accession Number for 16S rDNA gene: L16497) is a member of the Bacteroidetes division of the domain bacteria and has been isolated from human feces. It has been found in 16S rDNA sequence-based enumerations of the colonic microbiota of adult humans (Eckburg et. al. (2005), Ley et. al. (2006)).

Keywords: GSC:MIxS;MIGS:6.0

Links
DNA Source
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Submission
WUGSC; 2008-04-04
Accession:
SAMN00000002
ID:
2

BioProject SRA Nucleotide

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