U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

American Gut Project; 10129.000023835

Identifiers
BioSample: SAMEA3376700; SRA: ERS718462
Organism
human gut metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
Attributes
altitude0
body mass index20.8051449563
body habitatUBERON:feces
body productUBERON:feces
tissueUBERON:feces
depth0
elevation99.395362854
broad-scale environmental contextENVO:dense settlement biome
local-scale environmental contextENVO:human-associated habitat
sexfemale
geographic locationUSA: GAZ
height or length177.8
host subject id39fdb2e7eaf1be348bc8a4fe327766f7
host taxonomy ID9606 (9606)
raceCaucasian
sample nameqiime_ppdid_183:10129.000023835
sample typeStool
sexfemale
total mass65.7709718682
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2015-05-08T17:01:12Z
ENA-LAST-UPDATE2018-03-09T13:24:45Z
External IdSAMEA3376700
INSDC center nameCCME-COLORADO
INSDC first public2015-05-08T17:01:12Z
INSDC last update2018-03-09T13:24:45Z
INSDC statussuppressed
Submitter Idqiime_ppdid_183:10129.000023835
acne_medicationNo
acne_medication_otcNo
add_adhdI do not have this condition
age_months554
age_years46.1666666667
alcohol_frequencyOccasionally (1-2 times/week)
alcohol_types_beer_ciderYes
alcohol_types_red_wineYes
alcohol_types_sour_beersNo
alcohol_types_spirits_hard_alcoholYes
alcohol_types_unspecifiedNo
alcohol_types_white_wineNo
allergic_to_i_have_no_food_allergies_that_i_know_of_Yes
allergic_to_otherNo
allergic_to_peanutsNo
allergic_to_shellfishNo
allergic_to_tree_nutsNo
allergic_to_unspecifiedNo
alzheimersI do not have this condition
anonymized_name000023835
antibiotic_conditionNaN
antibiotic_medNaN
antibiotic_selectI have not taken antibiotics in the past year.
appendix_removedNo
asdI do not have this condition
assigned_from_geoYes
autoimmuneI do not have this condition
birth_monthFebruary
birth_year1969
bowel_movement_frequencyUnspecified
bowel_movement_qualityI tend to have diarrhea (watery stool)
breastmilk_formula_ensureNo
cardiovascular_diseaseI do not have this condition
catNo
cat_contactNaN
cat_locationNaN
cdiffI do not have this condition
chickenpoxYes
clinical_conditionI do not have this condition
collection_timestamp2015-02-26 00:00:00
common_namehuman gut metagenome
conditions_medicationYes
consume_animal_products_abxNot sure
contraceptiveYes, I am taking the pill
cosmetics_frequencyOccasionally (1-2 times/week)
country_of_birthUnited States
csectionNo
deodorant_useNot sure, but I use some form of deodorant/antiperspirant
depression_bipolar_schizophreniaI do not have this condition
diabetesI do not have this condition
diet_restrictions_listno sugar, grains, or unfermented dairy
diet_typeOmnivore
dna_extractedTrue
dogNo
dog_contactNaN
dog_locationNaN
drinking_water_sourceFiltered
env_matterENVO:feces
epilepsy_or_seizure_disorderI do not have this condition
exercise_frequencyDaily
exercise_locationDepends on the season
fed_as_infantPrimarily breast milk
fermented_plant_frequencyOccasionally (1-2 times/week)
flossing_frequencyRarely (a few times/month)
flu_vaccine_date6 months
frozen_desert_frequencyNever
fruit_frequencyRegularly (3-5 times/week)
fungal_overgrowthDiagnosed by a medical professional (doctor, physician assistant)
glutenI do not eat gluten because it makes me feel bad
handI am right handed
height_cm177.8
height_unitscentimeters
high_fat_red_meat_frequencyRarely (less than once/week)
homecooked_meals_frequencyDaily
ibdI do not have this condition
ibsDiagnosed by a medical professional (doctor, physician assistant)
kidney_diseaseI do not have this condition
lactoseYes
last_moveI have lived in my current state of residence for more than a year.
last_travel6 months
latitude47.6913
level_of_educationGraduate or Professional degree
liver_diseaseI do not have this condition
livingwithNo
longitude-122.382
lowgrain_diet_typeYes
lung_diseaseDiagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequencyDaily
medication_listbirth control, antihistamine,decongestant, asthma inhaler, Tylenol, Levsin
migraineI do not have this condition
milk_cheese_frequencyRegularly (3-5 times/week)
milk_substitute_frequencyRegularly (3-5 times/week)
multivitaminNo
nailNo
non_food_allergies_beestingsNo
non_food_allergies_drug__e_g__penicillin_Yes
non_food_allergies_pet_danderNo
non_food_allergies_poison_ivy_oakNo
non_food_allergies_sunNo
non_food_allergies_unspecifiedNo
olive_oilRegularly (3-5 times/week)
one_liter_of_water_a_day_frequencyRegularly (3-5 times/week)
other_condtitions_listIBS
other_supplement_frequencyNo
physical_specimen_locationUCSDMI
physical_specimen_remainingTrue
pkuI do not have this condition
pool_frequencyRarely (a few times/month)
poultry_frequencyRegularly (3-5 times/week)
pregnantNo
pregnant_due_dateNaN
prepared_meals_frequencyRarely (less than once/week)
probiotic_frequencyRarely (a few times/month)
publicy
race_otherNaN
ready_to_eat_meals_frequencyNever
red_meat_frequencyOccasionally (1-2 times/week)
relationships_with_others_in_studyNaN
required_sample_info_statuscompleted
roommates_in_studyNo
salted_snacks_frequencyNever
scientific_namehuman gut metagenome
seafood_frequencyOccasionally (1-2 times/week)
seasonal_allergiesNo
siboSelf-diagnosed
skin_conditionI do not have this condition
sleep_duration7-8 hours
smoking_frequencyNever
softenerYes
special_restrictionsYes
sugar_sweetened_drink_frequencyNever
sugary_sweets_frequencyNever
supplementsNaN
teethbrushing_frequencyDaily
thyroidI do not have this condition
tonsils_removedYes
travel_locations_listGreece, Turkey, Italy in Nov 2014
vegetable_frequencyDaily
vitamin_b_supplement_frequencyNever
vitamin_d_supplement_frequencyNever
weight_changeRemained stable
weight_kg65.7709718682
weight_unitskilograms
whole_eggsRegularly (3-5 times/week)
whole_grain_frequencyNever
willing_to_be_contactedYes
zip_code98117
Description

American Gut fecal sample

Submission
EBI; 2015-05-09
Accession:
SAMEA3376700
ID:
3650182

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center