U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Animal sample from Pangasianodon hypophthalmus (striped catfish) for VGP reference genome, fPanHyp1

Identifiers
BioSample: SAMN32348883; Sample name: Animal sample from Pangasianodon hypophthalmus (striped catfish) for VGP reference genome, fPanHyp1; SRA: SRS18698971
Organism
Pangasianodon hypophthalmus (striped catfish)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysi; Characiphysae; Siluriformes; Siluroidei; Pangasiidae; Pangasianodon
Package
Model organism or animal; version 1.0
Attributes
isolatefPanHyp1
development stagejuvenile
sexnot collected
tissueliver, muscle
biomaterial providerAxel Meyer, University of Konstanz
collected byJoost Woltering
geographic locationGermany: Frankfurt
latitude and longitude50.1109 N 8.6821 E
storage conditions-80oC
treatmentfrozen in 100% ETOH
Description

The striped catfish (Pangasianodon hypophthalmus) is a species of shark catfish (family Pangasiidae) native to the rivers of Southeast Asia. It has some morphological features that make it look like a shark. It is heavily cultivated as a food source, and endangered of extinction in the wild. This sample is from an animal collected by Joost Woltering and Axel Meyer from a fish market in Frankfurt, Germany, and likely from a breeding agriculture source. The sample was used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing was conducted at the the Max Planck Dresden Genome Center in Germany, conducted and coordinated by Gene Myers, Sylke Winkler, and Thomas Brown.

BioProjects
PRJNA1008549
Retrieve all samples from this project

PRJNA926961 Pangasianodon hypophthalmus
Retrieve all samples from this project

PRJNA914798 Pangasianodon hypophthalmus isolate:fPanHyp1
Retrieve all samples from this project

PRJNA914796 Pangasianodon hypophthalmus isolate:fPanHyp1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2022-12-21
Accession:
SAMN32348883
ID:
32348883

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center