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Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

Identifiers
BioSample: SAMN14384141; Sample name: FDAARGOS_983; SRA: SRS6357438
Organism
Severe acute respiratory syndrome coronavirus 2
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
isolate2019-nCoV/USA-WA1/2020
strainFDAARGOS_983
collected byBEI Resources/American Type and Culture Collection (ATCC)
collection date2020-01-19
geographic locationUSA
isolation sourceoropharyngeal swab
latitude and longitudenot applicable
culture collectionFDA:FDAARGOS_983
hostHomo sapiens
host descriptionIsolated from clinical sample from the first case of nCov in US from Washington State
host diseaseCOVID-19
passage historyA total of 4 passages; Vero (3) at CDC followed by Vero E6 (1) at BEI Resources
sample typegenomic RNA
reference for biomaterialBEI Resources catalog NR-52281 (lot 70033135)
links to additional analysishttps://wwwnc.cdc.gov/eid/article/26/6/20-0516_article
identification_methodPhenotypic and Molecular Methods
Laboratory HostVero E6 cells (CRL-1586)
Extraction MethodQIAamp Viral RNA kit using carrier tRNA
Description

SARS-CoV-2

BioProject
PRJNA231221
Retrieve all samples from this project

Submission
FDA_ARGOS; 2020-03-16
Accession:
SAMN14384141
ID:
14384141

BioProject SRA Nucleotide

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