Metagenome-Assembled Genome (MAG)

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Eubacteriales bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; environmental samples

Attributes

collection date	not provided
broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
environmental medium	faeces
geographic location	China
investigation type	metagenome-assembled genome
isolation source	human gut
project name	Human gut MAGs
sample name	MAG-GUT37213
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2019-04-23T08:03:35Z
ENA-LAST-UPDATE	2019-03-18T17:58:12Z
External Id	SAMEA5462377
INSDC center name	EBI
INSDC first public	2019-04-23T08:03:35Z
INSDC last update	2019-03-18T17:58:12Z
INSDC status	public
Submitter Id	MAG-GUT37213
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	SPAdes;3.10.0
binning parameters	default
binning software	MetaBAT v2.12.1
common name	uncultured Clostridiales bacterium
completeness score	67.38
completeness software	CheckM v1.0.7
contamination score	1.79
geographic location (latitude)	39.9138
geographic location (longitude)	116.3636
metagenomic source	human gut metagenome
sample derived from	SAMEA3708477
scientific_name	uncultured Clostridiales bacterium
sequencing method	Illumina
taxonomic identity marker	multi-marker approach